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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814587.1_cds_XP_016497988.1_12065
CDS Infomation

[gene=LOC107816763] [db_xref=GeneID:107816763] [protein=auxin-induced protein PCNT115] [protein_id=XP_016497988.1] [location=join(5455..5679,7625..7840,8689..8861,8949..9051,10073..10411)] [gbkey=CDS]
Sequence

ATGGCTAAAGAAGGAACAAAAGTGCCAAGAATTAAACTGGGTTCACAGGGGCTAGAAGTG
TCAGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTATGGGCCGCCCAAACCCGAA
CCCGATATGATCCAACTCATTCATCATGCCATCAATTCTGGTATCACTCTGCTTGATACT
TCAGATGTCTATGGACCCCACACTAACGAAATCCTACTTGGCAAGGCTTTGAAGGGTGGG
ACGAGAGAGCGAGTCGTGTTAGCAACAAAATTTGGTATTGTTTTAGGAGATGAAAAGAAA
GCAGAAGGGAAGAGAGCAGTGCATGGAGATCCAGCCTATGTAAGGGGTGCATGCGAGGCT
AGCTTAAAGCGACTTGATGTTGACTGCATTGACTTGTACTATCAGCACCGAGTTGATACA
CGCGTGCCAATTGAAGTCACGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATA
AAATATATAGGTCTATCCGAGGCATCAGCATCGACGATTAGAAGAGCACATGCAGTTCAT
CCAATAACAGCAGTACAATTAGAATGGTCTCTATGGTCTAGAGATGTAGAGGAAGAAATA
ATCCCTACTTGCAGAGAACTCGGTATTGGGATTGTGGCATACAGTCCATTAGGACGGGGC
TTTTTGTCATCAGGTCCGAAGTTGCTCGAGGATATGTCAAATGAAGACTACCGAAAGCAT
CTACCTAGGTTCCAGGCCGAGAATCTTGAGAATAACAAGAACTTGTACGAGAGGATTTGT
GAAATGGCAGTCAGGAAGGGGTGCACCCCGTCTCAACTAGCCTTGGCCTGGGTACATCAC
CAAGGAAACGACGTGTGTCCTATCCCCGGCACCACTAAGATTGAAAACTTGAACCAGAAC
ATCGGAGCTCTGTCCATAAAGTTAACATCAGAAGATATGGTAGAACTTGAATCCATTGCA
TCAGATAATGCAGTCCAGGGCGATCGGTACATTCCTGGTATGAGTACTTACAAAAATTCA
GAAACTCCACCTCTTTCAGCATGGAAGACTACTTAA

Peptide Sequence

PEP ID

XP_016497988.1
PEP Infomation

PREDICTED: auxin-induced protein PCNT115 [Nicotiana tabacum]
Sequence

MAKEGTKVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDT
SDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRGACEA
SLKRLDVDCIDLYYQHRVDTRVPIEVTVGELKKLVEEGKIKYIGLSEASASTIRRAHAVH
PITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDYRKH
LPRFQAENLENNKNLYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQN
IGALSIKLTSEDMVELESIASDNAVQGDRYIPGMSTYKNSETPPLSAWKTT

Transcript Sequence

Gene sequence data has not been registered.